Characterization of the complete chloroplast genome of Fraxinus chiisanensis (Oleaceae), an endemic to Korea
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Kim, Changkyun | - |
dc.contributor.author | Kim, Hyuk-Jin | - |
dc.contributor.author | Hoang Dang Khoa Do | - |
dc.contributor.author | Jung, Joonhyung | - |
dc.contributor.author | Kim, Joo-Hwan | - |
dc.date.available | 2020-02-27T04:40:53Z | - |
dc.date.created | 2020-02-04 | - |
dc.date.issued | 2019-03 | - |
dc.identifier.issn | 1877-7252 | - |
dc.identifier.uri | https://scholarworks.bwise.kr/gachon/handle/2020.sw.gachon/1770 | - |
dc.description.abstract | Fraxinus chiisanensis (Oleaceae), endemic to South Korea, is a deciduous tree and its natural populations are facing extinction due to habitat deterioration and low germination rates. Here, we characterized the complete chloroplast (cp) genome of F. chiisanensis using next-generation sequencing to provide an effective approach for achieving phylogenetic resolution and a fundamental conservation strategy. The F. chiisanensis cp genome was 155,541bp in length with a typical quadripartite structure, including the large (86,386bp) and small (17,767bp) single-copy regions, separated by a pair of identical inverted repeats (25,694bp). The genome encoded 132 genes, of which 113 were unique, including 80 protein coding genes, 29 tRNA genes, and 4 rRNA genes. The overall GC content of the cp genome was 37.9%. The Bayesian inference phylogram showed that F. chiisanensis is sister to the rest of the tribe Oleeae within Oleaceae. | - |
dc.language | 영어 | - |
dc.language.iso | en | - |
dc.publisher | SPRINGER | - |
dc.relation.isPartOf | CONSERVATION GENETICS RESOURCES | - |
dc.title | Characterization of the complete chloroplast genome of Fraxinus chiisanensis (Oleaceae), an endemic to Korea | - |
dc.type | Article | - |
dc.type.rims | ART | - |
dc.description.journalClass | 1 | - |
dc.identifier.wosid | 000460097500016 | - |
dc.identifier.doi | 10.1007/s12686-017-0969-9 | - |
dc.identifier.bibliographicCitation | CONSERVATION GENETICS RESOURCES, v.11, no.1, pp.63 - 66 | - |
dc.identifier.scopusid | 2-s2.0-85055591867 | - |
dc.citation.endPage | 66 | - |
dc.citation.startPage | 63 | - |
dc.citation.title | CONSERVATION GENETICS RESOURCES | - |
dc.citation.volume | 11 | - |
dc.citation.number | 1 | - |
dc.contributor.affiliatedAuthor | Kim, Changkyun | - |
dc.contributor.affiliatedAuthor | Hoang Dang Khoa Do | - |
dc.contributor.affiliatedAuthor | Jung, Joonhyung | - |
dc.contributor.affiliatedAuthor | Kim, Joo-Hwan | - |
dc.type.docType | Article | - |
dc.subject.keywordAuthor | Chloroplast genome | - |
dc.subject.keywordAuthor | Endemic species | - |
dc.subject.keywordAuthor | Fraxinus chiisanensis | - |
dc.subject.keywordAuthor | Oleaceae | - |
dc.subject.keywordAuthor | Oleeae | - |
dc.subject.keywordAuthor | Phylogenetic relationship | - |
dc.relation.journalResearchArea | Biodiversity & Conservation | - |
dc.relation.journalResearchArea | Genetics & Heredity | - |
dc.relation.journalWebOfScienceCategory | Biodiversity Conservation | - |
dc.relation.journalWebOfScienceCategory | Genetics & Heredity | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
Items in ScholarWorks are protected by copyright, with all rights reserved, unless otherwise indicated.
1342, Seongnam-daero, Sujeong-gu, Seongnam-si, Gyeonggi-do, Republic of Korea(13120)031-750-5114
COPYRIGHT 2020 Gachon University All Rights Reserved.
Certain data included herein are derived from the © Web of Science of Clarivate Analytics. All rights reserved.
You may not copy or re-distribute this material in whole or in part without the prior written consent of Clarivate Analytics.