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The complete mitochondrial genome of Sarcocheilichthys variegatus wakiyae (Cypriniformes, cyprinidae) and corresponding phylogenetic analysis
- Issue Date
- 2-Apr-2020
- Publisher
- TAYLOR & FRANCIS LTD
- Keywords
- Cypriniformes; Cyprinidae; Gobioninae; Sarcocheilichthys variegatus wakiyae; mitochondrial genome
- Citation
- Mitochondrial Dna Part B-resources, v.5, no.2, pp 1580 - 1581
- Pages
- 2
- Journal Title
- Mitochondrial Dna Part B-resources
- Volume
- 5
- Number
- 2
- Start Page
- 1580
- End Page
- 1581
- ISSN
- 2380-2359
- Abstract
- In this study, the complete mitochondrial genome of Sarcocheilichthys variegatus wakiyae was sequenced using samples collected from the Tamjin River (type locality), located in Jangheung-gun, Jeollanam-do, Republic of Korea. The complete mitochondrial genome of S. variegatus wakiyae includes 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, 2 ribosomal RNA (rRNA) genes, and a control region (D-loop), with a total length of 16,675 bp. The overall base nucleotide compositions encoded are 30.15% A, 26.71% C, 16.81% G, and 26.33% T with 56.48% A + T. The phylogenetic tree constructed using a neighbor-joining (NJ) method showed that S. variegatus wakiyae and S. variegatus microoculus are not sister groups, despite being subspecies of the same taxonomic species. Rather, S. variegatus wakiyae forms a sister group with S. hainanensis.
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Related Researcher
- Bang, In Chul
- College of Natural Sciences (Department of Biology)