An evolutionarily conserved non-synonymous SNP in a leucine-rich repeat domain determines anthracnose resistance in watermelon
DC Field | Value | Language |
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dc.contributor.author | Jang, Yoon Jeong | - |
dc.contributor.author | Seo, Minseok | - |
dc.contributor.author | Hersh, Craig P. | - |
dc.contributor.author | Rhee, Sun-Ju | - |
dc.contributor.author | Kim, Yongjae | - |
dc.contributor.author | Lee, Gung Pyo | - |
dc.date.available | 2019-03-08T06:56:16Z | - |
dc.date.issued | 2019-02 | - |
dc.identifier.issn | 0040-5752 | - |
dc.identifier.issn | 1432-2242 | - |
dc.identifier.uri | https://scholarworks.bwise.kr/cau/handle/2019.sw.cau/3240 | - |
dc.description.abstract | Key message: A non-synonymous SNP of CC–NBS–LRR was firstly mapped to confer resistance to anthracnose in watermelon. Newly proposed LRR domain harboring the SNP is evolutionary conserved in the Cucurbitaceae and Fabaceae. Abstract: Anthracnose disease caused by Colletotrichum devastates many plants. Despite the importance of the disease, the mechanisms of resistance against it are poorly understood. Here, we identified a non-synonymous single-nucleotide polymorphism (SNP) located in a leucine-rich repeat domain as a marker for resistance to anthracnose race 1 in watermelon, using a combination of genetic analyses. We validated this SNP in segregating populations and 59 watermelon accessions using high-resolution melting assays and Sanger sequencing. We demonstrated that the resulting arginine-to-lysine substitution is particularly conserved among the Cucurbitaceae and Fabaceae. We identified a conserved motif, IxxLPxSxxxLYNLQTLxL, found in 1007 orthologues/paralogues from 89 plant species, and discovered that residue 18 of this motif could determine resistance to disease caused by external invaders. This study provides a step forward in understanding anthracnose resistance in watermelon, as well as functional and evolutionary insight into leucine-rich repeat proteins. © 2018, Springer-Verlag GmbH Germany, part of Springer Nature. | - |
dc.format.extent | 16 | - |
dc.language | 영어 | - |
dc.language.iso | ENG | - |
dc.publisher | Springer Verlag | - |
dc.title | An evolutionarily conserved non-synonymous SNP in a leucine-rich repeat domain determines anthracnose resistance in watermelon | - |
dc.type | Article | - |
dc.identifier.doi | 10.1007/s00122-018-3235-y | - |
dc.identifier.bibliographicCitation | Theoretical and Applied Genetics, v.132, no.2, pp 473 - 488 | - |
dc.description.isOpenAccess | N | - |
dc.identifier.wosid | 000457002000015 | - |
dc.identifier.scopusid | 2-s2.0-85056721130 | - |
dc.citation.endPage | 488 | - |
dc.citation.number | 2 | - |
dc.citation.startPage | 473 | - |
dc.citation.title | Theoretical and Applied Genetics | - |
dc.citation.volume | 132 | - |
dc.type.docType | Article in Press | - |
dc.publisher.location | 미국 | - |
dc.subject.keywordPlus | DISEASE RESISTANCE | - |
dc.subject.keywordPlus | POWDERY MILDEW | - |
dc.subject.keywordPlus | LRR PROTEINS | - |
dc.subject.keywordPlus | COLLETOTRICHUM | - |
dc.subject.keywordPlus | GENOME | - |
dc.subject.keywordPlus | RECOGNITION | - |
dc.subject.keywordPlus | PATHOGENS | - |
dc.subject.keywordPlus | ALIGNMENT | - |
dc.subject.keywordPlus | IDENTIFICATION | - |
dc.subject.keywordPlus | DEPENDENCE | - |
dc.relation.journalResearchArea | Agriculture | - |
dc.relation.journalResearchArea | Plant Sciences | - |
dc.relation.journalResearchArea | Genetics & Heredity | - |
dc.relation.journalWebOfScienceCategory | Agronomy | - |
dc.relation.journalWebOfScienceCategory | Plant Sciences | - |
dc.relation.journalWebOfScienceCategory | Genetics & Heredity | - |
dc.relation.journalWebOfScienceCategory | Horticulture | - |
dc.description.journalRegisteredClass | sci | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
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