Gramella sabulilitoris sp. Nov., isolated from a marine sand
DC Field | Value | Language |
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dc.contributor.author | Park S. | - |
dc.contributor.author | Kim I.K. | - |
dc.contributor.author | Kim, Wonyong | - |
dc.contributor.author | Yoon J.-H. | - |
dc.date.available | 2020-04-22T09:20:24Z | - |
dc.date.issued | 2020 | - |
dc.identifier.issn | 1466-5026 | - |
dc.identifier.issn | 1466-5034 | - |
dc.identifier.uri | https://scholarworks.bwise.kr/cau/handle/2019.sw.cau/38970 | - |
dc.description.abstract | A Gram-stain-negative, aerobic, non-spore-forming, motile by gliding and rod-shaped bacterial strain, designated HSMS-1T, was isolated from a marine sand collected from the Yellow Sea, Republic of Korea, and identified by a polyphasic taxonomic approach. The neighbour-joining phylogenetic tree of 16S rRNA gene sequences showed that HSMS-1T fell within the clade comprising the type strains of species of the genus Gramella. HSMS-1T exhibited 16S rRNA gene sequence similarity values of 99.0 and 98.7% to the type strains of Gramella echinicola and Gramella sediminilitoris and of 93.3–98.5% to the type strains of the other species of the genus Gramella. The ANI and dDDH values between HSMS-1T and the type strains of G. echinicola, Gramella gaetbulicola, Gramella forsetii, Gramella salexigens, Gramella portivictoriae and Gramella flava were 72.6–79.3% and 17.4–22.2%, respectively. Mean DNA–DNA relatedness value between HSMS-1T and the type strain of G. sediminilitoris was 18%. HSMS-1T contained MK-6 as the predominant menaquinone and iso-C15:0, anteiso-C15:0, iso-C17:0 3-OH and iso-C16:0 as the major fatty acids. The major polar lipid of HSMS-1T was phosphatidylethanolamine. The DNA G+C content of HSMS-1T from genomic sequence data was 39.2%. Distinguishing phenotypic properties, along with the phylogenetic and genetic distinctiveness, revealed that HSMS-1T is separated from recognized species of the genus Gramella. On the basis of the data presented, strain HSMS-1T is considered to represent a novel species of the genus Gramella, for which the name Gramella sabulilitoris sp. nov. is proposed. The type strain is HSMS-1T(=KACC 19899T=NBRC 113648T). © 2020 The Authors. | - |
dc.format.extent | 6 | - |
dc.language | 영어 | - |
dc.language.iso | ENG | - |
dc.publisher | Microbiology Society | - |
dc.title | Gramella sabulilitoris sp. Nov., isolated from a marine sand | - |
dc.type | Article | - |
dc.identifier.doi | 10.1099/ijsem.0.003845 | - |
dc.identifier.bibliographicCitation | International Journal of Systematic and Evolutionary Microbiology, v.70, no.2, pp 909 - 914 | - |
dc.description.isOpenAccess | Y | - |
dc.identifier.wosid | 000522888400029 | - |
dc.identifier.scopusid | 2-s2.0-85081148887 | - |
dc.citation.endPage | 914 | - |
dc.citation.number | 2 | - |
dc.citation.startPage | 909 | - |
dc.citation.title | International Journal of Systematic and Evolutionary Microbiology | - |
dc.citation.volume | 70 | - |
dc.type.docType | Article | - |
dc.publisher.location | 영국 | - |
dc.subject.keywordAuthor | Genome | - |
dc.subject.keywordAuthor | Gramella sabulilitoris | - |
dc.subject.keywordAuthor | Marine sand | - |
dc.subject.keywordAuthor | Novel species | - |
dc.subject.keywordAuthor | Polyphasic taxonomy | - |
dc.subject.keywordPlus | fatty acid | - |
dc.subject.keywordPlus | menaquinone | - |
dc.subject.keywordPlus | phosphatidylethanolamine | - |
dc.subject.keywordPlus | RNA 16S | - |
dc.subject.keywordPlus | bacterial DNA | - |
dc.subject.keywordPlus | farnoquinone | - |
dc.subject.keywordPlus | sea water | - |
dc.subject.keywordPlus | Article | - |
dc.subject.keywordPlus | bacterial genome | - |
dc.subject.keywordPlus | bacterial strain | - |
dc.subject.keywordPlus | bacterium isolate | - |
dc.subject.keywordPlus | bacterium isolation | - |
dc.subject.keywordPlus | cladistics | - |
dc.subject.keywordPlus | DNA base composition | - |
dc.subject.keywordPlus | DNA DNA hybridization | - |
dc.subject.keywordPlus | gene sequence | - |
dc.subject.keywordPlus | Gram negative bacterium | - |
dc.subject.keywordPlus | Gramella echinicola | - |
dc.subject.keywordPlus | Gramella flava | - |
dc.subject.keywordPlus | Gramella forsetii | - |
dc.subject.keywordPlus | Gramella gaetbulicola | - |
dc.subject.keywordPlus | Gramella portivictoriae | - |
dc.subject.keywordPlus | Gramella sabulilitoris sp nov | - |
dc.subject.keywordPlus | Gramella salexigens | - |
dc.subject.keywordPlus | Gramella sediminilitoris | - |
dc.subject.keywordPlus | marine environment | - |
dc.subject.keywordPlus | nonhuman | - |
dc.subject.keywordPlus | phylogenetic tree | - |
dc.subject.keywordPlus | priority journal | - |
dc.subject.keywordPlus | sand | - |
dc.subject.keywordPlus | Yellow Sea | - |
dc.subject.keywordPlus | bacterium identification | - |
dc.subject.keywordPlus | chemistry | - |
dc.subject.keywordPlus | classification | - |
dc.subject.keywordPlus | DNA sequence | - |
dc.subject.keywordPlus | Flavobacteriaceae | - |
dc.subject.keywordPlus | genetics | - |
dc.subject.keywordPlus | isolation and purification | - |
dc.subject.keywordPlus | microbiology | - |
dc.subject.keywordPlus | nucleic acid hybridization | - |
dc.subject.keywordPlus | phylogeny | - |
dc.subject.keywordPlus | sand | - |
dc.subject.keywordPlus | South Korea | - |
dc.subject.keywordPlus | Bacterial Typing Techniques | - |
dc.subject.keywordPlus | Base Composition | - |
dc.subject.keywordPlus | DNA, Bacterial | - |
dc.subject.keywordPlus | Fatty Acids | - |
dc.subject.keywordPlus | Flavobacteriaceae | - |
dc.subject.keywordPlus | Nucleic Acid Hybridization | - |
dc.subject.keywordPlus | Phosphatidylethanolamines | - |
dc.subject.keywordPlus | Phylogeny | - |
dc.subject.keywordPlus | Republic of Korea | - |
dc.subject.keywordPlus | RNA, Ribosomal, 16S | - |
dc.subject.keywordPlus | Sand | - |
dc.subject.keywordPlus | Seawater | - |
dc.subject.keywordPlus | Sequence Analysis, DNA | - |
dc.subject.keywordPlus | Vitamin K 2 | - |
dc.relation.journalResearchArea | Microbiology | - |
dc.relation.journalWebOfScienceCategory | Microbiology | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
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