Protein structure abstraction and automatic clustering using secondary structure element sequences
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Park, SH | - |
dc.contributor.author | Park, Chang Yun | - |
dc.contributor.author | Kim, DH | - |
dc.contributor.author | Park, SH | - |
dc.contributor.author | Sim, JS | - |
dc.date.accessioned | 2023-02-15T09:52:35Z | - |
dc.date.available | 2023-02-15T09:52:35Z | - |
dc.date.issued | 2005-05 | - |
dc.identifier.issn | 0302-9743 | - |
dc.identifier.issn | 1611-3349 | - |
dc.identifier.uri | https://scholarworks.bwise.kr/cau/handle/2019.sw.cau/60664 | - |
dc.description.abstract | To study protein clustering is very important in diverse fields such as drug design and environmental industry. For a meaningful clustering, protein structure must be considered. But, protein structures are very complicated and have so much information such as angles, 3-dimensional coordinates. Thus, it is not easy to efficiently compute their relations. In this paper, we present a method to efficiently abstract and cluster protein structures using secondary structure element sequences. Since a secondary structure element sequence is an abstract representation of protein structure, it can be regarded as a useful descriptor to cluster a set of proteins at the abstraction level. Using secondary structure element sequences and their distances, we implemented an automatic protein clustering system and verify their efficiency by experimental results. | - |
dc.format.extent | 9 | - |
dc.language | 영어 | - |
dc.language.iso | ENG | - |
dc.publisher | SPRINGER-VERLAG BERLIN | - |
dc.title | Protein structure abstraction and automatic clustering using secondary structure element sequences | - |
dc.type | Article | - |
dc.identifier.doi | 10.1007/11424826_136 | - |
dc.identifier.bibliographicCitation | COMPUTATIONAL SCIENCE AND ITS APPLICATIONS - ICCSA 2005, PT 2, v.3481, pp 1284 - 1292 | - |
dc.description.isOpenAccess | N | - |
dc.identifier.wosid | 000229371400136 | - |
dc.citation.endPage | 1292 | - |
dc.citation.startPage | 1284 | - |
dc.citation.title | COMPUTATIONAL SCIENCE AND ITS APPLICATIONS - ICCSA 2005, PT 2 | - |
dc.citation.volume | 3481 | - |
dc.type.docType | Article; Proceedings Paper | - |
dc.publisher.location | 독일 | - |
dc.relation.journalResearchArea | Computer Science | - |
dc.relation.journalWebOfScienceCategory | Computer Science, Theory & Methods | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
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