Description of Defluviimonas salinarum sp. nov. with the potential of benzene-degradation isolated from saltern in the Yellow Seacoast
DC Field | Value | Language |
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dc.contributor.author | Lee, Yunjeong | - |
dc.contributor.author | Kim, Jong-Hwa | - |
dc.contributor.author | Yoon, Jung-Hoon | - |
dc.contributor.author | Lee, Jung-Sook | - |
dc.contributor.author | Sukhoom, Ampaitip | - |
dc.contributor.author | Kim, Wonyong | - |
dc.date.accessioned | 2024-01-12T05:32:02Z | - |
dc.date.available | 2024-01-12T05:32:02Z | - |
dc.date.issued | 2023-01 | - |
dc.identifier.issn | 0378-1097 | - |
dc.identifier.issn | 1574-6968 | - |
dc.identifier.uri | https://scholarworks.bwise.kr/cau/handle/2019.sw.cau/70959 | - |
dc.description.abstract | A novel species of Defluviimonas was isolated from a coastal saltern near the Yellow Sea. Strain CAU 1641(T) was isolated from saltern collected in Ganghwa Island, Republic of Korea. The bacterium was an aerobic, Gram-negative, catalase-positive, oxidase-positive, motile, and rod-shaped bacterium. Cell of strain CAU 1641(T) could grow at 20-40 degrees C and pH 6.0-9.0 with 1.0-3.0% (w/v) NaCl. Stain CAU 1641(T) shared high 16S rRNA gene sequence similarities with Defluviimonas aquaemixtae KCTC 42108(T) (98.0%), Defluviimonas denitrificans DSM 18921(T) (97.6%), and Defluviimonas aestuarii KACC 16442(T) (97.5%). Phylogenetic trees based on the 16S rRNA gene and the core-genome sequences indicated that strain CAU 1641(T) belonged to genus Defluviimonas. Strain CAU 1641(T) contained ubiquinone-10 (Q-10) as the sole respiratory quinone and and summed feature 8 (C-18:1 omega 6c and/or C-18:1 omega 7c) as the predominant fatty acid (86.1%). The pan-genome analysis indicated that the genomes of the strain CAU 1641(T) and 15 reference strains contain a small core genome. The Average Nucleotide Identity and digital DNA-DNA hybridization values among strain CAU 1641(T) and reference strains of the genus Defluviimonas were in the range of 77.6%-78.8% and 21.1-22.1%, respectively. The genome of strain CAU 1641(T) has several genes of benzene degradation. The genomic G + C content was 66.6%. Based on polyphasic and genomic analyses, strain CAU 1641(T) represents a novel species of the genus Defluviimonas, for which the name Defluviimonas salinarum sp. nov., is proposed. The type strain is CAU 1641(T) ( = KCTC 92081(T) = MCCC 1K07180(T)). | - |
dc.language | 영어 | - |
dc.language.iso | ENG | - |
dc.publisher | OXFORD UNIV PRESS | - |
dc.title | Description of Defluviimonas salinarum sp. nov. with the potential of benzene-degradation isolated from saltern in the Yellow Seacoast | - |
dc.type | Article | - |
dc.identifier.doi | 10.1093/femsle/fnad018 | - |
dc.identifier.bibliographicCitation | FEMS MICROBIOLOGY LETTERS, v.370 | - |
dc.description.isOpenAccess | N | - |
dc.identifier.wosid | 000950156600001 | - |
dc.identifier.scopusid | 2-s2.0-85160558911 | - |
dc.citation.title | FEMS MICROBIOLOGY LETTERS | - |
dc.citation.volume | 370 | - |
dc.type.docType | Article | - |
dc.publisher.location | 영국 | - |
dc.subject.keywordAuthor | Rhodobacteraceae | - |
dc.subject.keywordAuthor | saltern | - |
dc.subject.keywordAuthor | genome sequencing | - |
dc.subject.keywordAuthor | 16S rRNA gene sequence | - |
dc.relation.journalResearchArea | Microbiology | - |
dc.relation.journalWebOfScienceCategory | Microbiology | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
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