Sequence-characterized amplified polymorphism markers for selecting rind stripe pattern in watermelon (Citrullus lanatus L.)
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Kim, Hyeogjun | - |
dc.contributor.author | Han, Dongyeop | - |
dc.contributor.author | Kang, Jumsoon | - |
dc.contributor.author | Choi, Youngwhan | - |
dc.contributor.author | Levi, Amnon | - |
dc.contributor.author | Lee, Gung Pyo | - |
dc.contributor.author | Park, Younghoon | - |
dc.date.available | 2019-03-08T17:37:07Z | - |
dc.date.issued | 2015-06 | - |
dc.identifier.issn | 2211-3452 | - |
dc.identifier.issn | 2211-3460 | - |
dc.identifier.uri | https://scholarworks.bwise.kr/cau/handle/2019.sw.cau/9526 | - |
dc.description.abstract | The inheritance of foreground stripe pattern in rind of watermelon fruits [Citrullus lanatus (Thunb.) Matsum. & Nakai] was evaluated and molecular markers for selecting the Jubilee-type (JT) stripe pattern were developed based on bulked segregant analysis (BSA). Divergence in rind pattern among F-2 progeny derived from crossing Crimson-type (CT) 'Arka Manik' (AM) with JT 'TS34' (TS) indicated that stripe pattern is a quantitative trait controlled by more than one gene. The BSA of F-2 plants (derived from a cross between 'AM' and 'TS') using 60 random amplified polymorphic DNA (RAPD) primers revealed a distinct RAPD band (AT14-900) polymorphic between 'AM' (CT) and 'TS' (JT). The AT14-900 sequence (925 bp) was blasted to the reference watermelon (97103) genome and high sequence similarity (97.8%) was identified on physical location of 26246077 to 26246993 bp on chromosome 6. Two expressed sequence tags (ESTs) designated 'wsbin6-10' and 'wsbin6-11' that were closely linked to AT14-900 on a genetic linkage map (developed using the F-2 population derived from 'AM' x 'TS') were positioned 2,216 kb and 71 kb from AT14-900, respectively on the reference watermelon genome sequence. Marker genotyping of the F-2 population showed that wsbin6-11 was tightly linked to the JT stripe pattern of 'TS' and could be a useful codominant marker for selecting this trait. In a test using 100 breeding lines, 34 of the 36 lines carrying the JT stripe pattern were homozygous for the wsbin6-11 marker (450 bp) derived from 'TS', while other lines (e.g., with no stripe or CT stripe pattern) were homozygous for the wsbin6-11 marker (420 bp) derived 'AM'. These results indicated that wsbin6-11 would be a useful marker in watermelon breeding programs aiming to select for the JT stripe pattern from other various foreground and background rind patterns. | - |
dc.format.extent | 9 | - |
dc.language | 영어 | - |
dc.language.iso | ENG | - |
dc.publisher | KOREAN SOC HORTICULTURAL SCIENCE | - |
dc.title | Sequence-characterized amplified polymorphism markers for selecting rind stripe pattern in watermelon (Citrullus lanatus L.) | - |
dc.type | Article | - |
dc.identifier.doi | 10.1007/s13580-015-0017-1 | - |
dc.identifier.bibliographicCitation | HORTICULTURE ENVIRONMENT AND BIOTECHNOLOGY, v.56, no.3, pp 341 - 349 | - |
dc.identifier.kciid | ART002002931 | - |
dc.description.isOpenAccess | N | - |
dc.identifier.wosid | 000357749600010 | - |
dc.identifier.scopusid | 2-s2.0-84937427362 | - |
dc.citation.endPage | 349 | - |
dc.citation.number | 3 | - |
dc.citation.startPage | 341 | - |
dc.citation.title | HORTICULTURE ENVIRONMENT AND BIOTECHNOLOGY | - |
dc.citation.volume | 56 | - |
dc.type.docType | Article | - |
dc.publisher.location | 대한민국 | - |
dc.subject.keywordAuthor | cucurbits | - |
dc.subject.keywordAuthor | DNA marker | - |
dc.subject.keywordAuthor | fruit-related trait | - |
dc.subject.keywordAuthor | marker-assisted breeding | - |
dc.subject.keywordAuthor | maker-assisted selection | - |
dc.subject.keywordPlus | INHERITANCE | - |
dc.subject.keywordPlus | RESISTANCE | - |
dc.subject.keywordPlus | REGIONS | - |
dc.subject.keywordPlus | KOREA | - |
dc.relation.journalResearchArea | Agriculture | - |
dc.relation.journalWebOfScienceCategory | Horticulture | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
dc.description.journalRegisteredClass | kci | - |
Items in ScholarWorks are protected by copyright, with all rights reserved, unless otherwise indicated.
84, Heukseok-ro, Dongjak-gu, Seoul, Republic of Korea (06974)02-820-6194
COPYRIGHT 2019 Chung-Ang University All Rights Reserved.
Certain data included herein are derived from the © Web of Science of Clarivate Analytics. All rights reserved.
You may not copy or re-distribute this material in whole or in part without the prior written consent of Clarivate Analytics.