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Analysis of Expressed Sequence Tags from the Antarctic Psychrophilic Green Algae, Pyramimonas gelidicola
- Authors
- Jung, Woongsic; Lee, Sung Gu; Kang, Se Won; Lee, Yong Seok; Lee, Jun Hyuck; Kang, Sung-Ho; Jin, Eon Seon; Kim, Hak Jun
- Issue Date
- Jul-2012
- Publisher
- KOREAN SOC MICROBIOLOGY & BIOTECHNOLOGY
- Keywords
- Expressed sequence tags (ESTs); Pyramimonas gelidicola; psychrophilic; Antarctic; database
- Citation
- JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY, v.22, no.7, pp.902 - 906
- Indexed
- SCIE
SCOPUS
KCI
- Journal Title
- JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY
- Volume
- 22
- Number
- 7
- Start Page
- 902
- End Page
- 906
- ISSN
- 1017-7825
- Abstract
- Expressed sequence tags (ESTs) from the Antarctic green algae Pyramimonas gelidicola were analyzed to obtain molecular information on cold acclimation of psychrophilic microorganisms. A total of 2,112 EST clones were sequenced, generating 222 contigs and 219 singletons, and 200 contigs and 391 singletons from control (4 degrees C) and cold-shock conditions (-2 degrees C), respectively. The complete EST sequences were deposited to the DDBJ EST database (http://www.ddbinig.ac.jp/index-e.html) and the nucleotide sequences reported in this study are available in the DDBJ/EMBL/GenBank. These EST databases of Antarctic green algae can be used in a wide range of studies on psychrophilic genes expressed by polar microorganisms.
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Related Researcher
- Jin, Eon Seon
- COLLEGE OF NATURAL SCIENCES (DEPARTMENT OF LIFE SCIENCE)