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Investigation of the Cu binding site at [dCdG] and [CG] base pairs in the absence of a DNA backbone

Authors
Kim, Mi-JiKim, Bo-RaKim, Ho-Tae
Issue Date
21-Mar-2011
Publisher
ELSEVIER SCIENCE BV
Citation
CHEMICAL PHYSICS LETTERS, v.505, no.1-3, pp 57 - 64
Pages
8
Journal Title
CHEMICAL PHYSICS LETTERS
Volume
505
Number
1-3
Start Page
57
End Page
64
URI
https://scholarworks.bwise.kr/kumoh/handle/2020.sw.kumoh/22331
DOI
10.1016/j.cplett.2011.02.021
ISSN
0009-2614
1873-4448
Abstract
We investigated the gas-phase nucleobases [CGH](+1), [Cu(CG)](+1), [Cu(CG-H)](+1), and nucleoside [Cu(dCdG)](+1) complexes using collision-induced dissociation (CID) MS/ MS spectra. Two forms, the Watson- Crick complex form (cation-base-base) and an interstrand complex form (base-cation-base), were included in the analysis of the [cation-base pair] complex structures. The main cytosine loss dissociation channel of the [Cu(CG)](+1) complex was analyzed as the loss of an interstrand [Cu(CG)](+1) form instead of the Watson-Crick form. The -43 amu (CONH) and -68 amu (cytosine-CONH) loss fragments of the [Cu(CG-H)](+1) complex can be explained by the dissociation process of the interstrand [Cu(CG-H)](+1) form. (C) 2011 Elsevier B.V. All rights reserved.
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