Protein contact prediction by using information theory
DC Field | Value | Language |
---|---|---|
dc.contributor.author | Byeon, Jae-Young | - |
dc.contributor.author | Lee, Julian | - |
dc.date.available | 2018-05-08T14:43:21Z | - |
dc.date.created | 2018-04-17 | - |
dc.date.issued | 2017-05 | - |
dc.identifier.issn | 0374-4884 | - |
dc.identifier.uri | http://scholarworks.bwise.kr/ssu/handle/2018.sw.ssu/6386 | - |
dc.description.abstract | We develop a novel method for predicting the inter-residue contacts of a protein from evolutionary information obtained from the alignment of multiple sequences. Our method is based on information theory, where we use conditional mutual information so that the spurious correlations coming from indirect effects are removed. The benchmark test shows better performance than the previous method using mutual information does, suggesting the potential of the new method. | - |
dc.publisher | KOREAN PHYSICAL SOC | - |
dc.relation.isPartOf | JOURNAL OF THE KOREAN PHYSICAL SOCIETY | - |
dc.subject | MULTIPLE SEQUENCE ALIGNMENTS | - |
dc.subject | MUTUAL INFORMATION | - |
dc.subject | RESIDUE CONTACTS | - |
dc.subject | FAMILIES | - |
dc.subject | COVARIANCE | - |
dc.title | Protein contact prediction by using information theory | - |
dc.type | Article | - |
dc.identifier.doi | 10.3938/jkps.70.876 | - |
dc.type.rims | ART | - |
dc.identifier.bibliographicCitation | JOURNAL OF THE KOREAN PHYSICAL SOCIETY, v.70, no.9, pp.876 - 879 | - |
dc.identifier.kciid | ART002224412 | - |
dc.description.journalClass | 1 | - |
dc.identifier.wosid | 000401320200009 | - |
dc.identifier.scopusid | 2-s2.0-85027875407 | - |
dc.citation.endPage | 879 | - |
dc.citation.number | 9 | - |
dc.citation.startPage | 876 | - |
dc.citation.title | JOURNAL OF THE KOREAN PHYSICAL SOCIETY | - |
dc.citation.volume | 70 | - |
dc.contributor.affiliatedAuthor | Lee, Julian | - |
dc.type.docType | Article | - |
dc.subject.keywordAuthor | Protein structure prediction | - |
dc.subject.keywordAuthor | Contact prediction | - |
dc.subject.keywordPlus | MULTIPLE SEQUENCE ALIGNMENTS | - |
dc.subject.keywordPlus | MUTUAL INFORMATION | - |
dc.subject.keywordPlus | RESIDUE CONTACTS | - |
dc.subject.keywordPlus | FAMILIES | - |
dc.subject.keywordPlus | COVARIANCE | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
dc.description.journalRegisteredClass | kci | - |
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