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Complete Genome Sequences of Xanthomonas axonopodis pv. glycines Isolates from the United States and Thailand Reveal Conserved Transcription Activator-Like Effectorsopen access
- Authors
- Carpenter, Sara C. D.; Kladsuwan, Lawan; Han, Sang-Wook; Prathuangwong, Sutruedee; Bogdanove, Adam J.
- Issue Date
- May-2019
- Publisher
- OXFORD UNIV PRESS
- Keywords
- Xanthomonas axonopodis pv; Xanthomonas citri pv; glycines; TAL effectors; bacterial pustule of soybean; PacBio sequencing; plant pathogenic bacteria
- Citation
- GENOME BIOLOGY AND EVOLUTION, v.11, no.5, pp 1380 - 1384
- Pages
- 5
- Journal Title
- GENOME BIOLOGY AND EVOLUTION
- Volume
- 11
- Number
- 5
- Start Page
- 1380
- End Page
- 1384
- ISSN
- 1759-6653
- Abstract
- To compare overall genome structure and transcription activator-like effector content, we completely sequenced Xanthomonas axonopodis pv. glycines strain 12-2, isolated in 1992 in Thailand, and strain EB08, isolated in 2008 in the United States (Iowa) using PacBio technology. We reassembled the genome sequence for a second US strain, 8ra, derived from a 1980 Iowa isolate, from existing PacBio reads. Despite geographic and temporal separation, the three genomes are highly syntenous, and their transcription activator-like effector repertoires are highly conserved.
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