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MarSelHR: A haplotype reconstruction system using linkage disequilibrium
- Authors
- Yeo, Sang-Soo; Kim, Sung Kwon
- Issue Date
- Oct-2007
- Publisher
- IEEE COMPUTER SOC
- Citation
- PROCEEDINGS OF THE FRONTIERS IN THE CONVERGENCE OF BIOSCIENCE AND INFORMATION TECHNOLOGIES, pp 75 - 80
- Pages
- 6
- Journal Title
- PROCEEDINGS OF THE FRONTIERS IN THE CONVERGENCE OF BIOSCIENCE AND INFORMATION TECHNOLOGIES
- Start Page
- 75
- End Page
- 80
- ISSN
- 0000-0000
- Abstract
- We propose MarSelHR, a haplotype reconstruction system, which is a combination of LD based block partitioning with Clark's algorithm. MarSelHR uses less CPU processing time than other haplotype reconstruction systems, and makes possible large-scale data processing using less memory through block unit processing. Furthermore, MarSelHR involves biological meaning through LD based partitioning and is able to result in more precise inference.
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