Roseomonas oryzicola sp nov., isolated from the rhizosphere of rice (Oryza sativa L.)
DC Field | Value | Language |
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dc.contributor.author | Chung, Eu Jin | - |
dc.contributor.author | Yoon, Hwan Sik | - |
dc.contributor.author | Kim, Kyung Hyun | - |
dc.contributor.author | Jeon, Che Ok | - |
dc.contributor.author | Chung, Young Ryun | - |
dc.date.available | 2019-03-08T16:36:22Z | - |
dc.date.issued | 2015-12 | - |
dc.identifier.issn | 1466-5026 | - |
dc.identifier.issn | 1466-5034 | - |
dc.identifier.uri | https://scholarworks.bwise.kr/cau/handle/2019.sw.cau/8895 | - |
dc.description.abstract | A Gram-stain-negative, coccobacilli-shaped bacterium, designated YC6724(T), was isolated from the rhizosphere of rice in Jinju, Korea. The taxonomy of strain YC6724(T) was studied using a polyphasic approach. Strain YC6724(T) grew optimally at 30 degrees C and pH 7.0-8.0. Comparative 16S rRNA gene sequence analyses showed that the strain was most closely related to Roseomonas soli 5N26(T) (98.4 % 16S rRNA gene sequence similarity), Roseomonas lacus TH-G33(T) (97.3 %) and Roseomonas terrae DS-48(T) (97.3 %). Sequence similarities with other species of the genus Roseomonas with validly published names were lower than 94.0 %. Phylogenetic analysis based on the 16S rRNA gene sequence showed that strain YC6724(T) formed a distinct phyletic lineage within the genus Roseomonas. Strain YC6724(T) had DNA DNA relatedness values of 16.6 %, 44.0 % and 33.2 % with R. soli KACC 16376(T), R. terrae KACC 126771 and R. lacus KACC 11678(T), respectively. The predominant fatty acids of strain YC6724(T) were C-18 (:) (1)omega 7c and/or C-18 (:) (1)omega 6c, C-16 (:) (0) and C-18 (:) (1) 2-OH. The polar lipid profile contained phosphatidylethanolamine, phosphatidylcholine, phosphatidylglycerol, diphosphatidylglycerol, an unknown aminolipid and two unknown lipids. The G+C content of the genomic DNA was 70.5 mol% and the major quinone was Q-10. Strain YC6724(T) contained spermidine as the major polyamine. On the basis of phenotypic, chemotaxonomic and molecular data, it is clear that strain YC6724(T) represents a novel species of the genus Roseomonas, for which the name Roseomonas oryzicola sp. nov. is proposed. The type strain is YC6724(T) (=KCTC 22478(T)=NBRC 109439(T)). | - |
dc.format.extent | 6 | - |
dc.language | 영어 | - |
dc.language.iso | ENG | - |
dc.publisher | SOC GENERAL MICROBIOLOGY | - |
dc.title | Roseomonas oryzicola sp nov., isolated from the rhizosphere of rice (Oryza sativa L.) | - |
dc.type | Article | - |
dc.identifier.doi | 10.1099/ijsem.0.000656 | - |
dc.identifier.bibliographicCitation | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, v.65, no.12, pp 4839 - 4844 | - |
dc.description.isOpenAccess | N | - |
dc.identifier.wosid | 000370460600082 | - |
dc.identifier.scopusid | 2-s2.0-84955504108 | - |
dc.citation.endPage | 4844 | - |
dc.citation.number | 12 | - |
dc.citation.startPage | 4839 | - |
dc.citation.title | INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY | - |
dc.citation.volume | 65 | - |
dc.type.docType | Article | - |
dc.publisher.location | 영국 | - |
dc.subject.keywordPlus | CLINICAL-SIGNIFICANCE | - |
dc.subject.keywordPlus | HUMAN INFECTIONS | - |
dc.subject.keywordPlus | FRESH-WATER | - |
dc.subject.keywordPlus | BACTEREMIA | - |
dc.subject.keywordPlus | CATHETER | - |
dc.subject.keywordPlus | CANCER | - |
dc.subject.keywordPlus | SOIL | - |
dc.relation.journalResearchArea | Microbiology | - |
dc.relation.journalWebOfScienceCategory | Microbiology | - |
dc.description.journalRegisteredClass | sci | - |
dc.description.journalRegisteredClass | scie | - |
dc.description.journalRegisteredClass | scopus | - |
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