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Assessing Long-Term Stored Tissues for Multi-Omics Data Quality and Proteogenomics Suitability Go to Link

Song, Kyu Jin; Kim, Minsuh; Heo, Yong Jin; Cho, Kyung-Cho; Oh, Jae-Won; Kim, Dae Ho; Hwa, Chanwoong; Do, Yeji; Choi, Seunghyuk; Hwang, Hee Sang, et al.

ArticleIssue Date2025CitationJOURNAL OF PROTEOME RESEARCH, v.24, no.9, pp 4563 - 4574PublisherAMER CHEMICAL SOC

SCISCIESCOPUS

Characterization of disulfide bonds by planned digestion and tandem mass spectrometry Go to Link

Na, Seungjin; Paek, Eunok; Choi, Jong-Soon; Kim, Duwoon; Lee, Seung Jae; Kwon, Joseph

ArticleIssue Date2015CitationMolecular BioSystems, v.11, no.4, pp 1156 - 1164PublisherRoyal Society of Chemistry

SCIESCOPUS

Common Repository of FBS Proteins (cRFP) To Be Added to a Search Database for Mass Spectrometric Analysis of Cell Secretome Go to Link

Shin, Jihye; Kwon, Yumi; Lee, Seonjeong; Na, Seungjin; Hong, Eun Young; Ju, Shinyeong; Jung, Hyun-Gyo; Kaushal, Prashant; Shin, Sungho; Back, Ji Hyun, et al.

ArticleIssue Date2019CitationJOURNAL OF PROTEOME RESEARCH, v.18, no.10, pp.3800 - 3806PublisherAMER CHEMICAL SOC

SCIESCOPUS

CyGate Provides a Robust Solution for Automatic Gating of Single Cell Cytometry Data Go to Link

Na, Seungjin; Choo, Yujin; Yoon, Tae Hyun; Paek, Eunok

ArticleIssue Date2023CitationAnalytical Chemistry, v.95, no.46, pp 16918 - 16926PublisherAmerican Chemical Society

SCIESCOPUS

DbyDeep: Exploration of MS-Detectable Peptides via Deep Learning Go to Link

Son, Juho; Na, Seungjin; Paek, Eunok

ArticleIssue Date2023CitationAnalytical Chemistry, v.95, no.30, pp 11193 - 11200PublisherAmerican Chemical Society

SCOPUS

Demystifying PTM Identification Using MODplus: Best Practices and Pitfalls

Na, Seungjin; Paek, Eunok

ArticleIssue Date2024CitationMethods in molecular biology (Clifton, N.J.), v.2836, pp 37 - 55PublisherHumana Press, Inc.

SCISCIESCOPUS

Fast Multi-blind Modification Search through Tandem Mass Spectrometry Go to Link

Na, Seungjin; Bandeira, Nuno; Paek, Eunok

ArticleIssue Date2012CitationMolecular & Cellular Proteomics, v.11, no.4, pp 1 - 13PublisherAmerican Society for Biochemistry and Molecular Biology Inc.

SCIESCOPUS

MODi : a powerful and convenient web server for identifying multiple post-translational peptide modifications from tandem mass spectra Go to Link

Kim, Sangtae; Na, Seungjin; Sim, Ji Woong; Park, Heejin; Jeong, Jaeho; Kim, Hokeun; Seo, Younghwan; Seo, Jawon; Lee, Kong-Joo; Paek, Eunok

ArticleIssue Date2006CitationNucleic Acids Research, v.34, pp W258 - W263PublisherOxford University Press

SCISCIESCOPUS

MODplus: Robust and Unrestrictive Identification of Post-Translational Modifications Using Mass Spectrometry Go to Link

Na, Seungjin; Kim, Jihyung; Paek, Eunok

ArticleIssue Date2019CitationAnalytical Chemistry, v.91, no.17, pp 11324 - 11333PublisherAmerican Chemical Society

SCISCIESCOPUS

Monoisotopic Mass Determination Algorithm for Selenocysteine-Containing Polypeptides from Mass Spectrometric Data Based on Theoretical Modeling of Isotopic Peak Intensity Ratios Go to Link

Kim, Jin Wook; Lee, Sunho; Park, Kunsoo; Na, Seungjin; Paek, Eunok; Park, Hyung Seo; Park, Heejin; Lee, Kong-Joo; Jeong, Jaeho; Kim, Hwa-Young

ArticleIssue Date2012CitationJournal of Proteome Research, v.11, no.9, pp 4488 - 4498PublisherAmerican Chemical Society

SCIESCOPUS

Proteogenomic analysis reveals non-small cell lung cancer subtypes predicting chromosome instability, and tumor microenvironment Go to Link open access

Song, Kyu Jin; Choi, Seunghyuk; Kim, Kwoneel; Hwang, Hee Sang; Chang, Eunhyong; Park, Ji Soo; Shim, Seok Bo; Choi, Seunghwan; Heo, Yong Jin; An, Woo Ju, et al.

ArticleIssue Date2024CitationNature Communications, v.15, no.1, pp 1 - 25PublisherNature Publishing Group

SCIESCOPUS

Reinvestigation of Aminoacyl-TRNA Synthetase Core Complex by Affinity Purification-Mass Spectrometry Reveals TARSL2 as a Potential Member of the Complex Go to Link

Kim, Kyutae; Park, Seong-Jun; Na, Seungjin; Kim, Jun Seok; Choi, Hyungwon; Kim, Yoon Ki; Paek, Eunok; Lee, Cheolju

ArticleIssue Date2013CitationPLoS ONE, v.8, no.12, pp 1 - 14PublisherPublic Library of Science

SCISCIESCOPUS

SOFTWARE EYES FOR PROTEIN POST-TRANSLATIONAL MODIFICATIONS Go to Link

Na, Seungjin; Paek, Eunok

ArticleIssue Date2015CitationMass Spectrometry Reviews, v.34, no.2, pp 133 - 147PublisherJohn Wiley & Sons Inc.

SCIESCOPUS

Unrestrictive Identification of Multiple Post-translational Modifications from Tandem Mass Spectrometry Using an Error-tolerant Algorithm Based on an Extended Sequence Tag Approach Go to Link

Na, Seungjin; Jeong, Jaeho; Park, Heejin; Lee, Kong-Joo; Paek, Eunok

ArticleIssue Date2008CitationMolecular & Cellular Proteomics, v.7, no.12, pp 2452 - 2463PublisherAmerican Society for Biochemistry and Molecular Biology Inc.

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Browsing by Na, SeungjinAuthor

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