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Differentiation of Geographical Origin of White and Brown Rice Samples Using NMR Spectroscopy Coupled with Machine Learning Techniquesopen access

Authors
Saeed, MahamKim, Jung-SeopKim, Seok-YoungRyu, Ji EunKo, JuHeeZaidi, Syed Farhan AlamSeo, Jeong-AhKim, Young-SukLee, Do YupChoi, Hyung-Kyoon
Issue Date
Nov-2022
Publisher
MDPI
Keywords
rice; geographical origin; NMR spectroscopy; machine learning; prediction model
Citation
METABOLITES, v.12, no.11
Journal Title
METABOLITES
Volume
12
Number
11
URI
http://scholarworks.bwise.kr/ssu/handle/2018.sw.ssu/43488
DOI
10.3390/metabo12111012
ISSN
2218-1989
Abstract
Rice (Oryza sativa L.) is a widely consumed food source, and its geographical origin has long been a subject of discussion. In our study, we collected 44 and 20 rice samples from different regions of the Republic of Korea and China, respectively, of which 35 and 29 samples were of white and brown rice, respectively. These samples were analyzed using nuclear magnetic resonance (NMR) spectroscopy, followed by analyses with various data normalization and scaling methods. Then, leave-one-out cross-validation (LOOCV) and external validation were employed to evaluate various machine learning algorithms. Total area normalization, with unit variance and Pareto scaling for white and brown rice samples, respectively, was determined as the best pre-processing method in orthogonal partial least squares-discriminant analysis. Among the various tested algorithms, support vector machine (SVM) was the best algorithm for predicting the geographical origin of white and brown rice, with an accuracy of 0.99 and 0.96, respectively. In external validation, the SVM-based prediction model for white and brown rice showed good performance, with an accuracy of 1.0. The results of this study suggest the potential application of machine learning techniques based on NMR data for the differentiation and prediction of diverse geographical origins of white and brown rice.
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