An application of electrostatic repulsion hydrophilic interaction chromatography in phospho- and glycoproteome profiling of epicardial adipose tissue in obesity mouse
- Authors
- Huyen Tran, T.; Hwang, I.; Park, J.-M.; Bum Kim, J.; Lee, H.
- Issue Date
- 2012
- Keywords
- ERLIC; Glycoproteome enrichment; Phosphoproteome enrichment; PTMs; Simultaneous enrichment
- Citation
- Mass Spectrometry Letters, v.3, no.2, pp.39 - 42
- Journal Title
- Mass Spectrometry Letters
- Volume
- 3
- Number
- 2
- Start Page
- 39
- End Page
- 42
- URI
- https://scholarworks.bwise.kr/gachon/handle/2020.sw.gachon/17506
- DOI
- 10.5478/MSL.2012.3.2.39
- ISSN
- 2233-4203
- Abstract
- Phosphorylation and glycosylation are two of the most important and widespread post-translational modifications (PTMs) in an organism. Proteomics analysis of the PTMs has been challenged by low stoichiometry of the modified proteins and suppression effects by high abundance proteins, typically no-functional house-keeping proteins. In this study, a novel method was applied for not only isolating PTM peptides from intact peptides but also concurrently characterizing of glyco- and phospho-proteome using electrostatic repulsion hydrophilic interaction chromatography (ERLIC) packed with silica coated by cross-linked polyethyleneimine. For 2 mg tryptic digest of mouse proteome of epicardial adipose tissue with fat diet, 802 N-glycosy-lated peptides of 316 glycoproteins and 159 phosphorylated peptides of 75 phosphoproteins were identified using HPLC chip/ quadrupole time-of-flight (Q-TOF) tandem mass spectrometer.
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